Targeted Gene Expression Protocol Compatibility Table

Demonstrated Protocol, Last Modified on June 21, 2022, Permalink

Compatibility of different species and panel formats with the Single Cell Targeted and Spatial Targeted Gene Expression assays. Pre-designed panels are currently only available for human genes. Fully custom panels are not supported with the Spatial Targeted Gene Expression assay, as described here.

Panel type Panel Vendor & format Single Cell Gene Expression or Immune Profiling, Human Single Cell Gene Expression or Immune Profiling, Mouse Visium Spatial Gene Expression Fresh Frozen, Human Visium Spatial Gene Expression Fresh Frozen, Mouse
Pre-designed panels 10x Genomics
Add-on panels IDT xGEN Custom Hyb Panels, IDT NGS Discovery Pools*, IDT xGEN Lockdown Probe Pools*
Fully custom panels IDT xGEN Custom Hyb Panels, IDT NGS Discovery Pools*, IDT xGEN Lockdown Probe Pools*
Fully custom panels Biotinylated Amplified Twist Oligo Pools (CG000412)