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10x Genomics
Single Cell CNV

Cell Ranger DNA , printed on 04/06/2025

CNV_REANALYZER_CSDLOUPE_PREPROCESS_BREAKPOINT_PIPELINEAGGREGATE_NODES_NODE_BREAKPOINT_CALLERCREATE_CNV_TRACKS_AND_BEDDETECT_BREAKPOINTSESTIMATE_CNV_CONFIDENCE_NODE_NORMALIZERESTIMATE_NORMALIZATION_PARAMETERSNORMALIZE_PROFILESREPORT_NORMALIZATION_SC_BREAKPOINT_CALLERCREATE_CNV_TRACKS_AND_BEDDETECT_BREAKPOINTSESTIMATE_CNV_CONFIDENCE_SC_NORMALIZERESTIMATE_NORMALIZATION_PARAMETERSNORMALIZE_PROFILESREPORT_NORMALIZATION_TREE_BUILDERCLUSTER_CELLSCREATE_NODE_PROFILES_POSTPROCESSINGCOMPILE_CNV_DATAMAKE_ALARMSMAKE_WEBSUMMARY_REANALYZE_PREFLIGHT_SETUP_REANALYZE_SAMPLES
←  CNV_REANALYZER_CS

A Cell Ranger DNA pipeline that performs reanalysis of a cellranger-dna cnv pipestance using custom parameters - for example, filtering out cells, or specifying a custom tree.